|
Gene/Marker
|
Descriptor
|
|
a1
|
Vertical arrangement of leaves (371)
|
|
Aact1
|
The ScAACT1 gene at the Qalt5 locus is as a candidate for increased aluminum tolerance (495)
|
|
Aadh >>> Adh
|
Aromatic alcohol dehydrogenase
|
|
Aat syn Got
|
Aspartat aminotransferase
|
|
AawR173-3 Petkus rye59
|
Rye-specific PCR DNA primers
|
|
AawR173-3 King II
|
Rye-specific PCR DNA primers
|
|
Ac
|
Color of anthers
|
|
Acc240
|
Acetyl-CoA carboxylase (423)
|
|
Acl
|
Acyl carrier protein
|
|
Acl1.2 syn Xwayc4
|
|
|
Acl1.3 syn Xwayc2
|
|
|
Aco
|
Aconitase
|
|
Acp
|
Acid phosphatase
|
|
Acph >>> Acp
|
|
|
Adgp2 syn Xwye838
|
|
|
Adgp3 syn Xwye1858
|
|
|
alb
|
Albinism of seedling
|
|
Adh
|
Alcohol dehydrogenase
|
|
Adh syn Xcsd19
|
|
|
Adk
|
Adenylate kinase isomerase
|
|
Al
|
Length of anthers (358)
|
|
al syn el
|
Absent ligule
|
|
Almt142
|
Malate transporter gene likely responsible for aluminum tolerance (365,428,429)
|
|
Alp
|
Alkine phosphatase
|
|
alpha-Amy3 syn Xpsr14
|
|
|
Alt1-6RS
|
Tolerance to excess of aluminum (410)
|
|
Alt2-3RS
|
Tolerance to excess of aluminum, major locus (348,410,428); secretion of organic acids malate and citrate are accociated with the
presence of Alt2 (417)
|
|
Alt3-4RL
|
Tolerance to excess of aluminum (410,428)
|
|
Alt4-7RS53
|
Tolerance to excess of aluminum (409,410,428,448); encodes an
aluminum-activated organic acid transporter gene that could be utilized to increase Al tolerance in Al sensitive plant species
|
|
Amp syn Lap
|
Aminopeptidase
|
|
Amy...
|
amylase 30 (386)
|
|
an1 syn vi1
|
Anthocyaninless (pale seeds)
|
|
an2
|
Anthocyaninless leaf base
|
|
An1
|
Anthocyanin (green seeds)
|
|
An1a
|
Anthocyanin (green seeds)
|
|
An1b
|
Anthocyanin (green seeds)
|
|
An3,4,6
|
Anthocyanin (purple seeds)
|
|
An5 syn R, R1
|
Anthocyanin (purple leaf base)
|
|
An7
|
Anthocyanin (purple leaf base)
|
|
Ans58
|
Anthocyanidin synthaseof anthocyanin biosynthesis pathway (476)
|
|
Anu...
|
Antinutritive component
|
|
Apr >>> Xapr
|
|
|
APase
|
Root secretion of acid phosphatase (413)
|
|
asc...
|
Asynaptic chromosome pairing (343)
|
|
Asi >>> I(as) >>> Si
|
|
|
atp
|
Mitochondrial genes (321)
|
|
au
|
Aurea
|
|
AW15 >>> Xaw15
|
cDNA clone
|
|
Axc
|
Arabinoxylan content on 2R and 3R (381), other genes on chromosomes 1R, 4R, 6R (509)
|
|
B... >>> Xb...
|
Primers (410)
|
|
BIII >>> I(a-BIII)
|
|
|
BCD... >>> Xbcd...
|
Primers (410)
|
|
Be syn firm
|
Brittle ear
|
|
bg
|
Brown glumes
|
|
beta-Glu1
|
beta-Glucosidase
|
|
bn
|
Bent lowest internode
|
|
br...
|
Brittle stem (101,335,514)
|
|
br >>> bs
|
|
|
bs syn br
|
Branched stem (32,514)
|
|
Bt
|
Tolerance to excess of boron
|
|
Byd
|
Tolerance to barley yellow dwarf virus
|
|
Cat
|
Catalase
|
|
Cat syn Xpsr484
|
|
|
cb
|
Brown stem
|
|
Cbt
|
Resistance to karnal bunt (Neovossia indica)
|
|
Ce
|
Copper efficiency
|
|
centr
|
Centromere
|
|
Chi58
|
Chalcone-flavanone isomerase of anthocyanin biosynthesis pathway (476)
|
|
Chl
|
Chlorophyll deficiency
|
|
Cl
|
Shorter coleoptile length (426); coleoptile length seems
to be partially dominant to long coleoptile; no correlation between seed weight and coleoptile length exists
|
|
cl >>> lu
|
|
|
Clr1 >>> Ner
|
Hybrid chlorosis in wheat-rye hybrids (444)
|
|
Cm
|
Chlorofom-methanol proteins
|
|
Cm16 syn Xmtd862
|
|
|
Cnr syn Cre
|
Resistance to cereal cyst nematode (Heterodera avenae)
|
|
Co
|
Corroded
|
|
cob
|
A mitochondrial gene responsible for an abnormal transcript causing male-sterile cytoplasm in rye (Pampa type) (339)
|
|
Cxp1 syn Xwia483
|
|
|
Cre >>> Cnr
|
|
|
CreR >>> Cnr and Cre
|
|
|
cs
|
Shortened stamens and coalesced (374)
|
|
ct55...
|
Short straw mutants
|
|
ct255
|
Short straw mutant (compact spike)
|
|
ct355
|
Compactum growth habit
|
|
CTer
|
Terminal DNA sequence
|
|
Cut
|
Tolerance to excess of copper
|
|
Cxp
|
Carboxypeptidase
|
|
Cxp3 syn Xpsr8
|
|
|
Ddw55... syn Dw55...
|
Dominant dwarfness 55
|
|
de
|
Downward directed spikes (377)
|
|
De syn N
|
Dark ear
|
|
Dec
|
Dietary fibers content (381)
|
|
Dia33
|
Diaphorase
|
|
Dn2414
|
Resistance to the Russian wheat aphid, Diuraphis noxia, of the wheat line, ST-ARS 02RWA2414- 11 (517)
|
|
Dn7 syn Dnr syn Gbr
|
Resistance to the Russian wheat aphid (310)
|
|
Dnr syn Gbr
|
Resistance to (green bug) aphid, dominant (Diuraphis noxia) (467)
|
|
dr syn sr
|
Secondary root system defective
|
|
drr
|
Resistance to drought
|
|
ds155
|
Recessive dwarfness (382)
|
|
dsc...
|
Desynaptic chromosome pairing (343)
|
|
dw55
|
Dwarf plant
|
|
dw855 syn Dw21,55
|
Dwarf plant, recessive (201,504), found in inbred line RXL10, sensitive to exogenously applied gibberellic acid
|
|
dw9-6RL
|
Dwarf plant, recessive, found in Bashirskaja karlikovaja mutant line, insensitive to exogenously applied gibberellic acid (529)
|
|
Dw155 syn Ddw155 syn Hl55
|
(371)
|
|
Ec
|
Color of spike
|
|
eh
|
Early heading
|
|
el >>> al
|
Eligulatum
|
|
Embp syn Xrsq805
|
|
|
Embp1 syn Xrsq805
|
|
|
Embp2 syn Xrsq805
|
|
|
Eml-1Ra48
|
Embryo lethality in wheat-rye hybrids, two alleles, compatible (364,440,441,442)
|
|
Eml-1Rb48
|
Embryo lethality in wheat-rye hybrids, incompatible (364,440,441,442)
|
|
En(ae)
|
Enhancer of androgenous embryoids wheat-rye substitutions in vitro (384)
|
|
En(ai)
|
Enhancer of albino induction in anther culture
|
|
En(gi)
|
Enhancer of genome instability of wheat (383)
|
|
En(hi)
|
Enhancer of anther culture ability and haploid induction
|
|
En(cg)
|
Enhancer of callus growth in vitro
|
|
En(edu)17
|
Enhancer of equational division of univalents
|
|
En(em)
|
Enhancer of embryogenesis in vitro
|
|
Ep...
|
Endopeptidase
|
|
epr >>> wa
|
|
|
epr1 >>> wa1
|
|
|
Er...
|
Early ripening
|
|
es >>> wg
|
|
|
Est43...
|
Esterase
|
|
Fa
|
Flag leaf area
|
|
Fbp syn Xpsr39
|
|
|
F3h58
|
Flavanone 3-hydroxylase of anthocyanin biosynthesis pathway (476)
|
|
firm >>> Be
|
|
|
Fl
|
Length of flag leaf
|
|
Fr
|
Resistance to Fusarium ssp.
|
|
fs
|
Fine stripe
|
|
fv
|
Flavovirescent
|
|
Fw
|
Width of flag leaf
|
|
(GACA)4
|
Oligomer with tetranucleotide motif after FISH (281); in the karyogram given as red dots
|
|
Gai
|
Gibberellic acid insensitivity
|
|
Gal
|
Galactosidase
|
|
Gb... >>> Dnr syn Gbr
|
Green bug resistance, dominant (467)
|
|
Gbr >>> Dnr >>> Gb
|
|
|
Gbs
|
Primer derived from granule-bound starch synthetase (GBSSI), also known as waxy) gene (363) (455)
|
|
gd55 syn mn55
|
Grass dwarfness
|
|
Ger147
|
Gene encodes a bifunctional 3,5-epimerase-4-reductase in L-fucose synthesis
|
|
Gdh
|
Glutamate dehydrogenase
|
|
Glb3 syn Xwia807
|
|
|
Gli
|
Gliadin >>> Secalin (458)
|
|
Gli-R1 >>> Sec1
|
|
|
Gli-R3 >>> Sec4
|
|
|
Glob syn Xrsq808
|
|
|
GloB
|
Three-beta-globin
|
|
Glu...
|
Glutenin >>> Secalin (458)
|
|
Glu-R1 >>> Sec3
|
|
|
Glu syn Glu1
|
|
|
Glu1 >>> Glu
|
|
|
Glu3 syn Xpsr11 >>> Sec3
|
|
|
Got syn Aat
|
Aspartat aminotransferase
|
|
Gpd
|
Glucose-6-phosphatase dehydrogenase
|
|
Gpi syn Pgi
|
Glucose phosphate isomerase
|
|
gr
|
Grassy plant habit
|
|
H syn Hfr
|
Resistance to Hessian fly (Mayetiola destructor) (459)
|
|
H155 syn Dw155
|
Dominant short-straw mutant (371)
|
|
Ha syn Hp syn Hs35
|
Hairy leaf sheath/peduncle
|
|
Hd163
|
Flowering date (500)
|
|
Hdw-R1B
|
Hybrid dwarfism = grass-clump phenotype in wheat-rye crosses (497)
|
|
HemA
|
HemA-gene encodes glutamyl-tRNA reductase
|
|
Hfr >>> H
|
|
|
Hg syn V
|
Hairy glume
|
|
Hl55 syn Dw155 syn Ddw155
|
251
|
|
Hm138
|
Resistance to lethal leaf blight and ear mold disease caused by Cochliobolus carbonum, race 1 (CCR1);
common in all grasses; detected in maize and barley (421)
|
|
Hma
|
3-hydroxymugineic acid synthetase
|
|
Hp >>> Hs >>> Ha35
|
|
|
Hs >>> Ha and Hp35
|
Hairy leaf sheath
|
|
Hsp17.3 syn Xttu1935
|
|
|
Hsps >>> I(hsps)
|
|
|
Ia >>> I(a)
|
|
|
I(a...)
|
alpha-amylase inhibitor (299)
|
|
I(a-BIII)
|
alpha-amylase inhibitor gene containing 354 nucleotides that encode amino acids (341)
|
|
I(Amy) >>> I(a)
|
Amylase inhibitor
|
|
I(as) syn Si syn Asi syn Isa
|
alpha-amylase/subtilisin inhibitor (299)
|
|
I(ae)
|
Inhibitor of androgenous embryoids wheat-rye substitutions in vitro (384)
|
|
I(hsps)
|
Suppressor effect on accumulation of HSP18 and HSP70 transcripts
|
|
I(et)
|
Major endosperm trypsin inhibitor
|
|
Ibf
|
Iodine binding factor
|
|
I(dha)
|
Inhibitor of insect alpha-amylase (RDAI)
|
|
I(dsc1)15
|
Dominant inhibitor suppressing desynaptic chromosome pairing (343)
|
|
I(ncw)
|
Inhibitor of novel cell wall formation in wheat (396)
|
|
I(scx)37
|
Secale cereale xylanase inhibitor (411)
|
|
Il
|
Internode length
|
|
Isa syn I(as)
|
|
|
Kn
|
Number of seeds per spike (361,499)
|
|
Kw..., kw...
|
Thousand-kernel weight (336,499,506)
|
|
Lec syn Xmsu488
|
|
|
ln
|
Light nodes (351)
|
|
Ln
|
Length of second internode
|
|
Iph >>> Per >>> Prx
|
|
|
La
|
Anthocyanin in ligule
|
|
la
|
Leafy awn (378)
|
|
Lap >>> Amp
|
|
|
Lc
|
Color of leaf
|
|
Ldh
|
Lactate dehydrogenase
|
|
lg
|
Light-green leaf color
|
|
ln
|
Light node
|
|
Ln
|
Number of leaves of stem
|
|
lo
|
Onion-like leaves (379)
|
|
lr
|
adaxial rolling of leaves, after drought stress (521)
|
|
Lr136 - Lr syn Pr1
|
Resistance to leaf (brown) rust (Puccinia recondita, P. dispersa) 6RL (380, 399, 400)
|
|
Lr-a
|
Resistance to leaf rust (Puccinia recondita) 1R
|
|
Lr-c
|
Resistance to leaf rust (Puccinia recondita) 1R
|
|
Lr-g
|
Resistance to leaf rust (Puccinia recondita)
|
|
Lra(7)
|
Resistance to leaf rust (Puccinia recondita), isolate 7 (350)
|
|
Lra(12)
|
Resistance to leaf rust (Puccinia recondita), isolate 12 (350)
|
|
Lra(24)
|
Resistance to leaf rust (Puccinia recondita), isolate24 (486)
|
|
Lra(25)
|
Resistance to leaf rust (Puccinia recondita), isolate25 (350)
|
|
Lra(81)
|
Resistance to leaf rust (Puccinia recondita), isolate 81 (350)
|
|
Lra(108)
|
Resistance to leaf rust (Puccinia recondita), isolate 108 (350)
|
|
lu syn cl
|
Lutescent
|
|
Lw
|
Leaf waxiness
|
|
Lys
|
Lysine
|
|
Mal
|
Malic enzyme
|
|
Mas
|
Mugineic acid synthetase
|
|
Mate161
|
Al-induced citrate transporter gene (494,495)
|
|
mc
|
Monoculm growth habit (374)
|
|
Mdh
|
Malate dehydrogenase
|
|
Me
|
Manganese efficiency
|
|
mn55 >>> gd55
|
Multinodosum, dwarf habit55
|
|
mn255
|
Dwarfness with double increased number of internodes (376)
|
|
mo50
|
Monstrous growth habit (446); showing additional spikelets per spike
|
|
mp
|
Multiple pistils
|
|
mrs1 >>> mo1>>> mo
|
(446)
|
|
ms >>> Rf >>> Rfg2
|
Male sterility (368)
|
|
msh syn Xc, Xs, Xr
|
mismatch repair gene homologs msh2 syn Xc11; msh3 syn Xs2; msh6 syn Xr2 (456)
|
|
mu1 >>> mo
|
Multiflowered spike (371,446)
|
|
N >>> De
|
|
|
Nar
|
Nitrate reductase
|
|
Nc
|
Color of nodes
|
|
Nca
|
Neocentric activity
|
|
Ndh
|
NADH dehydrogenase
|
|
Ner
|
Hybrid necrosis (124,443)
|
|
Ngc
|
Non-cellulosic glucose content
|
|
Nl
|
Neck length
|
|
Nor
|
Nucleolar organizer region
|
|
np55
|
Nana prostratum, short-stem ‘inch-gitl’
|
|
Npg65
|
Number of pollen grains per anther (502)
|
|
ol
|
Onion accrected leaves
|
|
or
|
Orange
|
|
pAWRC.1
|
3.4 kbp repetitive segment of retrotransposon-like elements (419,420;460) localized within the centromere of rye chromosomes without FISH signal
in wheat chromosomes
|
|
P(cp) >>> En(cp)
|
Homoeologous pairing promoter
|
|
Pc
|
Purple culm
|
|
pe
|
Perennial growth habit
|
|
P(Edu) >>> En(edu)
|
Promoter of equational division of univalents
|
|
Per syn Prx
|
Peroxidase
|
|
Per syn Xpsr833
|
|
|
Pdk1 syn Xhhu1
|
|
|
pfs
|
Partial floret sterility
|
|
Pgd
|
6-phosphogluconate dehydrogenase
|
|
Pgi >>> Gpi
|
|
|
Pgm
|
Phosphoglucomutase
|
|
Pgs1
|
Resistance to stem rust (Puccinia graminis f. sp. secalis) (532)
|
|
Pgt
|
Parthenogenesis induction
|
|
Ph >>> QTL3-5RL
|
Plant height (499)
|
|
Pi
|
Tolerance to inorganic orthophosphate (Pi) starvation stress (413)
|
|
Pl >>> QTL4-5RL
|
Peduncle length
|
|
Pm
|
Resistance to powdery mildew
|
|
Pm20
|
Powdery mildew from rye “Prolific” (478); confers a high level of resistance to the Chinese races of Blumeria graminis f. sp. tritici
|
|
Pm56
|
Powdery mildew from rye “Qinling” (524); confers resistance to the Chinese races of Blumeria graminis f. sp. tritici
|
|
pol-r
|
Mitochondrial gene (323)
|
|
Pr3, Pr4, Pr5
|
Dominant resistance to Puccinia recondita f. sp. secalis (307)
|
|
Pr3 >>> Sec4
|
55-kD-seed protein, genes coding for seed protein on chromosomes 4R and 6R (509)
|
|
Pro
|
Proline
|
|
Prx >>> Per
|
Peroxidase
|
|
Ps syn Vs
|
Purple seeds
|
|
psbD
|
Coding for components of the reaction center of photosystem II and D2 protein
|
|
psbI
|
Coding for a polypeptide
|
|
pSc34 >>> Xpsc34
|
350-480 bp family from S. cereale
|
|
pSc74 >>> Xpsc74
|
610 bp family from S. cereale
|
|
pSc119.2 >>> Xpsc119.2
|
120 bp family from S. cereale (510)
|
|
pSc200 >>> Xpsc200
|
Highly repetitive sequence from S. cereale
|
|
pScJNK1 >>> XpscJNK1
|
Novel highly repetitive sequence from S. cereale (402)
|
|
pScT7 >>> Xpsc77
|
5S rDNA form S. cereale
|
|
PSR154
|
cDNA clone, by HindIII
|
|
pTa71
|
25S-5.8S-18S rDNA from T. aestivum
|
|
Pur-R1 >>> Xpur-R1
|
|
|
Py
|
Yield per plant (361)
|
