Map 1RS

centr

msh2 (Xc11) –456
pAWRC.1 –419,460
Pgi-R1 –437
S5 –447
Xcdo344 –300,437
Xcsih69 –437
X1R1 -543
Xucr1 –447

1RS2.4 (telomere)

Xpsc200 –460

1RS

AawR173-3P –200
AawR173-3K –200
C1-1RS –300,437
Cm1 –264
Cm2 –264
Cm3 –264
Cm4 –264
Dn2414 - 517
Dnr1 –92,168,234,347
En(hi)1 –246,263,273
En(em)1 –183
En(em)2 –183
I(as)2 –54,67
L1Per1 –39
Lr3³⁶ syn Pr3 –307,399
Lr(7) –350
Lr(12) –350
Lr(25) –350
Lr(81) –350
Lr(108) –350
Per2 –223
Per7 –3,55,166,266,285,350,437
Per13/15 –139
Pgt –240
Pm⁶² –244,347,498
Pm111 –10,64,97,171,256
Pr-i –415
QTL13-1RS¹⁴ –207,515
QTL21-1RS¹⁶ –346
QTL24-1RS¹⁶ –404,407
QTL42-1RS –404,405
QTL65-1RS¹⁶ –430
QTL79-1RS¹⁶ –430
rd –56
Tri –299,412,430
Wsm –92
Xabc156 –330
Xabc160 –300,437
Xad16-850 –479
Xapr1.2 –299,412,430
Xapr1.3 –299,412,430
Xapr1.5 –299,412,430
Xapr1.6 –299,412,430
Xapr1.8 –355,412,430
Xapr1.9 –355,412
Xapr1.10 –355,412,430
Xapr1.21 –412,430
Xapr1.22 –412,430
Xapr1.23 –430
Xapr1.24 –430
XbaI –482
Xbsd12 –299,412
Xbcd22 –300,437
Xbcd98 –285,299,412,430,437
Xbcd115 –437
Xbcd200 –437
Xbcd921 –300,437
Xbcd927 –267,437
Xbcd1072 –285,300,437
Xbcd1434 –437
Xbm2 –266
Xbmac213 –331,469
Xcdo99 –285,299,412,430
Xcdo580 –266,285,300,302,437
Xcdo658 –437
Xcdo1188 –299,412,437
Xcfe023 –533
Xcslrgh3.1 –330
Xcslrgh3.2 –330
Xeacc-mctg424 –479
Xeacg-mcgt189- –479
Xeata-mcgc410 –479
Xecgc-mcag163 –479
Xem1.1 –355,412
Xem1.2 –355,412
Xem1.5 –355,412
Xem1.6 –355,412
Xem1.8 –355,412
Xem1.9 –355,412
Xem1.10 –355,412
Xem1.11 –355,412
Xem1.15 –355,412
Xem1.18 –355,412
Xem1.19 –355,412
Xem1.20 –355,412
Xem1.21 –355,412
Xem1.22 –355,412,430
Xem1.24 –355,412
Xem1.25 –355,412
Xem1.27 –355,412,430
Xem1.28 –355,412
Xem1.29 –355,412,430
Xem1.30 –355,412
Xem1.31 –355,412
Xem1.32 –355,412,430
Xem1.33 –355
Xem1.34 –355
Xem1.35 –355
Xem1.36 –355
Xgpi –331,412
Xglu3 –165
Xia215 –330
Xia294 –330
Xia299 –330
Xiag79 –266
Xiag95-1000 –412
Xiag229b –274
Xiag249 –285
Xib159 –330
Xib262 –330
Xib544 –330
Ximc1 –243
Ximc2 –243
Xir15 –479
Xir26re7-790 –479
Xis1.1 –412
Xissr5-1000 –479
XksuE19 –330
XksuG9 –330
Xlprm61 –431
Xlprm62 –431
Xlrk10 –266,437
Xme4em3-580 –479
Xme4em5-760 –479
Xmsh2 –266
Xmwg60 –330
Xmwg68 –330,347
Xmwg837 –266,276,302
Xmwg913a –266,276,285,302,437
Xmwg913b –266,276,302
Xmwg938 –266,276,285,302
Xmwg2062a –266,276,302,437
Xopr2-470 –274
Xp12/m53-f-119-p2 –431
Xp12/m59-f-121-p2–431
Xp12/m59-f-177-p2 –431
Xp12/m61-f-94-p2–431
Xp12/m61-f-103-p2–431
Xp12/m61-f-320-p2–431
Xp15/m53-f-58-p2 –431
Xp16/m56-f-3345-p2 –431
Xp17/m57-f-123-p2 –431
Xp17/m60-f-106-p2 –431
Xp17/m60-f-177a-p2 –431
Xpic31 –330
Xpsr11 –299,412,430
Xpsr109 –299,412
Xpsr158 –300,437
Xpsr161 –437
Xpsr300 –299
Xpsr391 –300,437
Xpsr393 –299,437
Xpsr544 –285
Xpsr596 –299,300,412,430,
Xbcd921 –300,437
Xpsr601 –437
Xpsr634 –266,285,299,300,302,412,437
Xpsr937 –266,302,412,437
Xpsr937(1) –206,286,299
Xpsr937(2) –206,299,430
Xpsr941 –206,412
Xpsr941L –299
Xpsr949 –206,299,412,430,437
Xpsr957 –299, 300,412,437
Xpsr960 –331
Xrems1135-1R –308
Xrga39 –330
Xrms13 –331
X5s –331,472
Xs10-1 –332
Xs10-6 –332
Xs10-11 –332
Xs10-16a –332
Xs10-16b –332
Xs17d-3a –332
Xs17d-3b –332
Xs17d-3c –332
Xs17d-4 –332
Xs17d-7a –332
Xs17d-7c –332
Xs17d-9 –332
Xs17d-10a –332
Xs17d-12a –332
Xs17d-12b –332
Xs17d-12c –332
Xs17d-14a –332
Xs17d-14c –332
Xs17u-1 –332
Xs17u-9 –332
Xs20-2a –332
Xs20-2b –332
Xs20-5 –332
Xs20-9 –332
Xs20-16 –332
Xscb190 –285
Xscb241 –266
Xscb258b –266
Xscg75 –300,437
Xscm1 –469
Xscm9 –266,331,437,457,469
Xscm21 –431
Xscm32 –479
Xscm36 –431
Xscm39 –437
Xscm127 –431,457,469
Xscm269 –431
Xtc6051 –431
Xtc6893 –431
Xtrx1100 –412
Xtsm118 –469
Xtsm275 –469
Xtsm332 –469
Xtsm492 –469
Xtsm592.2 –469
Xuah30 –267,437
Xubp18 –412,430
Xubp19 –299,412,430
Xulp18 –299
Xwg876 –266,437

1RS2.3.2

pSec2B –237
QTL89-1RS –447
Rga⁵¹
Sec1 –16,165,222,237,342,354,460
Xiag95 –169,244,266,274,331,430,460,,507
Xib267 –460,507
Xora12 –460,507
Xp6m12-P –460,507
Xtsm92 –460,507
Xtsm120 –460,507
Xtsm460 –460,507

1RS2.2-1RS2.4

pSc200 –282
Lr26,Sr31,Yr9 –447
Pm8⁶² –447,498
S6 –447
Sec1 –447
Sec3 –447
Xucr4 –447
Xucr5 –447
Xucr6 –447
Xucr7 –447
Xucr8 –447

SAT

En(cg)1 –183,263
Dnr2 –467
Dnr6 –467
Xcslh6910 –12
Xcslh6913 –12
Xpsr161⁴⁴ –5,200,206,285,412,430,437
Xpsr393 –5,206

1RS2

Xtsm16-1R –452,469
Xtsm27-1R –452
Xtsm29-1R –452
Xtsm92-1R –452
Xtsm94-1R –452
Xtsm106-1R –452
Xtsm120-1R –452
Xtsm121-1R –452
Xtsm123-1R –452
Xtsm143-1R –452
Xtsm149-1R –452
Xtsm181-1R –452,469
Xtsm211-1R –452
Xtsm221-1R –452
Xtsm239-1R –452
Xtsm294-1R –452,469
Xtsm303-1R –452
Xtsm306-1R –452
Xtsm312-1R –452
Xtsm322-1R –452
Xtsm326-1R –452,469
Xtsm387-1R –452
Xtsm422-1R –452
Xtsm461-1R –452
Xtsm468-1R –452,469
Xtsm471-1R –452
Xtsm472-1R –452,469
Xtsm520-1R –452
Xtsm556-1R –452
Xtsm593-1R –452
Xtsm604-1R –452
Xtsm665-1R –452
Xtsm638-1R –452
Xtsm652-1R –452
Xtsm661-1R –452
Xtsm685-1R –452
Xtsm690-1R –452

1RS2.1–centr

Xbcd1072 –228
Xscg75 –228
Xpsr957 –206,228

1RS1.1–centr

Xora7 –460,507
Tr(T273W) –205
Xplug1017 –460,507
Xtsm21 –460,507
Xtsm86-1R –452,460,507
Xtsm103 –452,460,507

1RS2.2⁵⁴

Nor1⁵⁴ –78,80,197,412,430
5S-rDNA1¹⁸,⁵⁴ –123,469
18S-26S rDNA –487
pScT7 –231
pTa71 –238
pTa794 –218
XNor1⁵⁴ –80,165,300,437
Xtri –12,197

1RS1.2–centr

Tr(T273W) –205

1RS1.2

Xora3 –460,507
Xora4 –460,507
Xora6 –460,507
Xora8 –460,507
Xora11 –460,507
Xtsm39 –460,507
Xtsm81 –452,460,469,480,507
Xtsm109 –452,460,507
Xtsm111 –452,460,507

1RS2.3–centr

Xwg184 –200
Xbcd1072 –200
Xcdo1173 –200
Xcd01188 –200
Xmwg506 –276
Xpsr168 –165,200
Xpsr393 –200
Xr173-1 –200
Xr173-2 –200
Xr173-3 –200

1RS1.3

Xscm9 –460,507
Xtsm587 –460,507

1RS2.4

Dn7 –310
pSc200 –282
pSchet1 –6,96,197
Xter1 –200
Xbcd1434 –267,310
XksuD14 –266,310

1RS1.4

Xora7 –460,507
Xtsm123 –460,507
Xtsm294 –460,507

1RS2.3

Gpi1 –16,205,264,430
Lr1 –10,172,197
pScT7 –238
Sec4 –16,197,222
Sr+ –145,197
Sr1 –10,59,97,197
Sr31 –389
Xbcd98 –200
XcsIH69 –200
XksuE18 –200
XksuE19 –200
X5sdna –200
XksuG9 –200
Xpsr688 –200
Yr1 –19,171,197

1RS1.1–1RS1.4

Xtsm10-1R –452
Xtsm12-1R –452
Xtsm16-1R –452
Xtsm25-1R –452
Xtsm54-1R –452
Xtsm61-1R –452
Xtsm104-1R –452
Xtsm162-1R –452
Xtsm179-1R –452
Xtsm191-1R –452
Xtsm197-1R –452
Xtsm200-1R –452
Xtsm213-1R –452,469,480
Xtsm228-1R –452
Xtsm279-1R –452,,469,480
Xtsm282-1R –452
Xtsm314-1R –452
Xtsm315-1R –452,469
Xtsm319-1R –452
Xtsm325-1R –452
Xtsm350-1R –452,469
Xtsm364-1R –452
Xtsm366-1R –452
Xtsm460-1R –452
Xtsm480-1R –452
Xtsm575-1R –452
Xtsm587 –452,460,469
Xtsm608-1R –452,469
Xtsm634-1R –452,469
Xtsm645-1R –452
Xtsm662-1R –452
Xtsm676-1R –452
Xtsm690-1R –452,469
Xtsm700-1R –452
Xtsm704-1R –452

1RS1.1–1RS2.1

Tr(T273W) –205
Xucr3 –447

1RS1.1–centr

Pr3 –307
Xucr2 –447

1RS1.1–1RS1.2

Xtsm21-1R –452
Xtsm39-1R –452
Xtsm108-1R –452
Xtsm132-1R –452
Xtsm145-1R –452
Xtsm230-1R –452
Xtsm235-1R –452
Xtsm241-1R –452
Xtsm264-1R –452
Xtsm266-1R –452
Xtsm268-1R –452
Xtsm329-1R –452
Xtsm347-1R –452
Xtsm355-1R –452
Xtsm411-1R –452
Xtsm435-1R –452
Xtsm460-1R –452
Xtsm469-1R –452
Xtsm480-1R –452
Xtsm497-1R –452
Xtsm502-1R –452
Xtsm535-1R –452
Xtsm552-1R –452,469
Xtsm553-1R –452
Xtsm559-1R –452
Xtsm565-1R –452
Xtsm593-1R –452
Xtsm596-1R –452
Xtsm598-1R –452
Xtsm604-1R –452
Xtsm609-1R –452
Xtsm621-1R –452
Xtsm623-1R –452
Xtsm625-1R –452
Xtsm626-1R –452
Xtsm641-1R –452
Xtsm642-1R –452
Xtsm651-1R –452
Xtsm655-1R –452
Xtsm656-1R –452
Xtsm680-1R –452
Xtsm683-1R –452
Xtsm704-1R –452
Xtsm706-1R –452
Xtsm708-1R –452
Xtsm714-1R –452
Xtsm716-1R –452
Xtsm718-1R –452
Xtsm719-1R –452

1RS2.3–1RS2.1

Xpsr596 –200,228,293,312
Xcdo580 –228,276
Xpsr937 –228,276
Xpsr634 –206,276

Figure 1: Flow-sorted chromosomes 1RS after double FISH with a FITC-labeled probe for 45S rDNA (the probe highlights NOR in yellow-green color) and Cy3-labelled probe for rye-specific repeat pSc200 (red color); the chromosomes were counterstained with DAPI (blue color); with permission of Kubaláková et al. 2003 and Šimková et. al. 2008 (450, 451)

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